[Lustre-discuss] HW RAID - fragmented I/O

Shipman, Galen M. gshipman at ornl.gov
Fri Jun 10 06:25:36 PDT 2011


Wojciech, 

We have seen similar issues with DM-Multipath. Can you experiment with going straight to the block device without DM-Multipath? 

Thanks,

Galen 

On Jun 10, 2011, at 8:00 AM, Wojciech Turek wrote:

> Hi Kevin,
> 
> Thanks for very helpful answer. I tried your suggestion and recompiled the
> mpt2sas driver with the following changes:
> 
> --- mpt2sas_base.h      2010-01-16 20:57:30.000000000 +0000
> +++ new_mpt2sas_base.h  2011-06-10 12:53:35.000000000 +0100
> @@ -83,13 +83,13 @@
> #ifdef CONFIG_SCSI_MPT2SAS_MAX_SGE
> #if     CONFIG_SCSI_MPT2SAS_MAX_SGE  < 16
> #define MPT2SAS_SG_DEPTH       16
> -#elif CONFIG_SCSI_MPT2SAS_MAX_SGE  > 128
> -#define MPT2SAS_SG_DEPTH       128
> +#elif CONFIG_SCSI_MPT2SAS_MAX_SGE  > 256
> +#define MPT2SAS_SG_DEPTH       256
> #else
> #define MPT2SAS_SG_DEPTH       CONFIG_SCSI_MPT2SAS_MAX_SGE
> #endif
> #else
> -#define MPT2SAS_SG_DEPTH       128 /* MAX_HW_SEGMENTS */
> +#define MPT2SAS_SG_DEPTH       256 /* MAX_HW_SEGMENTS */
> #endif
> 
> #if defined(TARGET_MODE)
> 
> However I can still that almost 50% of writes and slightly over 50% of reads
> falls under 512K I/Os
> I am using device-mapper-multipath to manage active/passive paths do you
> think that could have something to do with the I/O fragmentation?
> 
> Best regards,
> 
> Wojciech
> 
> On 8 June 2011 17:30, Kevin Van Maren <kevin.van.maren at oracle.com> wrote:
> 
>> Yep, with 1.8.5 the problem is most likely in the (mpt2sas) driver, not in
>> the rest of the kernel.  Driver limits are not normally noticed by
>> (non-Lustre) people, because the default kernel limits IO to 512KB.
>> 
>> May want to see Bug 22850 for the changes required eg, for the Emulex/lpfc
>> driver.
>> 
>> Glancing at the stock RHEL5 kernel, it looks like the issue is
>> MPT2SAS_SG_DEPTH, which is limited to 128.  This appears to be set to match
>> the default kernel limit, but it is possible there is also a driver/HW
>> limit.  You should be able to increase that to 256 and see if it works...
>> 
>> 
>> Also note that the size buckets are power-of-2, so a "1MB" entry is any IO
>>> 512KB and <= 1MB.
>> 
>> If you can't get the driver to reliably do full 1MB IOs, change to a 64KB
>> chunk and set max_sectors_kb to 512.  This will help ensure you get aligned,
>> full-stripe writes.
>> 
>> Kevin
>> 
>> 
>> 
>> Wojciech Turek wrote:
>> 
>>> I am setting up a new lustre filesystem using LSI engenio based disk
>>> enclosures with integrated dual RAID controllers. I configured disks
>>> into 8+2 RAID6 groups using 128kb segment size (chunk size). This
>>> hardware uses mpt2sas kernel module on the Linux host side. I use the
>>> whole block device for an OST (to avoid any alignment issues). When
>>> running sgpdd-survey I can see high through numbers (~3GB/s write,
>>> 5GB/s read), Also controllers stats show that number of IOPS = number
>>> of MB/s. However as soon as I put ldiskfs on the OSTs, obdfilter shows
>>> slower results (~2GB/s write , ~2GB/s read ) and controller stats show
>>> more then double IOPS than MB/s. Looking at output from iostat -m -x 1
>>> and brw_stats I can see that a large number of I/O operations are
>>> smaller than 1MB, mostly 512kb.  I know that there was some work done
>>> on optimising the kernel block device layer to process 1MB I/O
>>> requests and that those changes were committed to Lustre 1.8.5. Thus I
>>> guess this I/O chopping happens below the Lustre stack, maybe in the
>>> mpt2sas driver?
>>> 
>>> I am hoping that someone in Lustre community can shed some light on to
>>> my problem.
>>> 
>>> In my setup I  use:
>>> Lustre 1.8.5
>>> CentOS-5.5
>>> 
>>> Some parameters I tuned from defaults in CentOS:
>>> deadline I/O scheduler
>>> 
>>> max_hw_sectors_kb=4096
>>> max_sectors_kb=1024
>>> 
>>> 
>>> brw_stats output
>>> --
>>> 
>>> find /proc/fs/lustre/obdfilter/ -name "testfs-OST*" | while read ost;
>>> do cat $ost/brw_stats ; done | grep "disk I/O size" -A9
>>> 
>>> disk I/O size          ios   % cum % |  ios   % cum %
>>> 4K:                    206   0   0   |  521   0   0
>>> 8K:                    224   0   0   |  595   0   1
>>> 16K:                   105   0   1   |  479   0   1
>>> 32K:                   140   0   1   | 1108   1   3
>>> 64K:                   231   0   1   | 1470   1   4
>>> 128K:                  536   1   2   | 2259   2   7
>>> 256K:                 1762   3   6   | 5644   6  14
>>> 512K:                31574  64  71   | 30431  35  50
>>> 1M:                  14200  28 100   | 42143  49 100
>>> --
>>> disk I/O size          ios   % cum % |  ios   % cum %
>>> 4K:                    187   0   0   |  457   0   0
>>> 8K:                    244   0   0   |  598   0   1
>>> 16K:                   109   0   1   |  481   0   1
>>> 32K:                   129   0   1   | 1100   1   3
>>> 64K:                   222   0   1   | 1408   1   4
>>> 128K:                  514   1   2   | 2291   2   7
>>> 256K:                 1718   3   6   | 5652   6  14
>>> 512K:                32222  65  72   | 29810  35  49
>>> 1M:                  13654  27 100   | 42202  50 100
>>> --
>>> disk I/O size          ios   % cum % |  ios   % cum %
>>> 4K:                    196   0   0   |  551   0   0
>>> 8K:                    206   0   0   |  551   0   1
>>> 16K:                    79   0   0   |  513   0   1
>>> 32K:                   136   0   1   | 1048   1   3
>>> 64K:                   232   0   1   | 1278   1   4
>>> 128K:                  540   1   2   | 2172   2   7
>>> 256K:                 1681   3   6   | 5679   6  13
>>> 512K:                31842  64  71   | 31705  37  51
>>> 1M:                  14077  28 100   | 41789  48 100
>>> --
>>> disk I/O size          ios   % cum % |  ios   % cum %
>>> 4K:                    190   0   0   |  486   0   0
>>> 8K:                    200   0   0   |  547   0   1
>>> 16K:                    93   0   0   |  448   0   1
>>> 32K:                   141   0   1   | 1029   1   3
>>> 64K:                   240   0   1   | 1283   1   4
>>> 128K:                  558   1   2   | 2125   2   7
>>> 256K:                 1716   3   6   | 5400   6  13
>>> 512K:                31476  64  70   | 29029  35  48
>>> 1M:                  14366  29 100   | 42454  51 100
>>> --
>>> disk I/O size          ios   % cum % |  ios   % cum %
>>> 4K:                    209   0   0   |  511   0   0
>>> 8K:                    195   0   0   |  621   0   1
>>> 16K:                    79   0   0   |  558   0   1
>>> 32K:                   134   0   1   | 1135   1   3
>>> 64K:                   245   0   1   | 1390   1   4
>>> 128K:                  509   1   2   | 2219   2   7
>>> 256K:                 1715   3   6   | 5687   6  14
>>> 512K:                31784  64  71   | 31172  36  50
>>> 1M:                  14112  28 100   | 41719  49 100
>>> --
>>> disk I/O size          ios   % cum % |  ios   % cum %
>>> 4K:                    201   0   0   |  500   0   0
>>> 8K:                    241   0   0   |  604   0   1
>>> 16K:                    82   0   1   |  584   0   1
>>> 32K:                   130   0   1   | 1092   1   3
>>> 64K:                   230   0   1   | 1331   1   4
>>> 128K:                  547   1   2   | 2253   2   7
>>> 256K:                 1695   3   6   | 5634   6  14
>>> 512K:                31501  64  70   | 31836  37  51
>>> 1M:                  14343  29 100   | 41517  48 100
>>> 
>>> 
>>> 
>> 
>> 
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